Publications

2014

  • X. {de la Rosa}, A. Cervera, A. K. Kristoffersen, C. P. Valdes, H. M. Varma, C. Justicia, T. Durduran, A. Chamorro, and A. M. Planas, “Mannose-binding lectin promotes local microvascular thrombosis after transient brain ischemia in mice,” Stroke, vol. accepted in press, 2014.
    [Bibtex]
    @Article{annaplanasMBL2013,
    author = {{de la Rosa}, X and Cervera, A and Kristoffersen, A K and Valdes, C P and Varma, H M and Justicia, C and Durduran, T and Chamorro, A and Planas, A M},
    title = {Mannose-binding lectin promotes local microvascular thrombosis after transient brain ischemia in mice},
    journal = {Stroke},
    year = {2014},
    OPTkey = {},
    tdnote = {icfoonlypaper, have pdf},
    volume = {accepted in press},
    OPTnumber = {},
    OPTpages = {},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • D. R. Busch, R. Choe, T. Durduran, D. H. Friedman, A. D. Maidment, M. A. Rosen, M. D. Schnall, and A. G. Yodh, “Blood flow reduction in breast tissue due to mammographic compression,” Academic radiology, vol. 21, pp. 151-161, 2014.
    [Bibtex]
    @Article{davidbuschcompression2013,
    author = {Busch, D R and Choe, R and Durduran, T and Friedman, D H and Maidment, A D and Rosen, M A and Schnall, M D and Yodh, A G},
    title = {Blood Flow Reduction in Breast Tissue Due to Mammographic Compression},
    journal = {Academic Radiology},
    year = {2014},
    OPTkey = {},
    volume = {21},
    OPTnumber = {2},
    pages = {151-161},
    OPTmonth = {},
    tdnote = {have pdf},
    OPTannote = {}
    }
  • P. Farzam, C. Lindner, U. M. Weigel, M. Suarez, A. {Urbano-Ispizua}, and T. Durduran, “Noninvasive characterization of the healthy human manubrium using diffuse optical spectroscopies,” Phys meas, vol. accepted, 2014.
    [Bibtex]
    @Article{parisasternumbonemarrow2013,
    author = {Farzam, P and Lindner, Claus and Weigel, U M and Suarez, M and {Urbano-Ispizua}, A and Durduran, T},
    title = {Noninvasive characterization of the healthy human manubrium
    using diffuse optical spectroscopies},
    journal = {Phys Meas},
    year = {2014},
    OPTkey = {},
    tdnote = {icfoonlypaper, have pdf},
    volume = {accepted},
    OPTnumber = {},
    OPTpages = {},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • P. Zirak, R. {Delgado-Mederos}, L. Dinia, J. {Martí–Fàbregas}, and T. Durduran, “Microvascular vs macrovascular cerebral vasomotor reactivity in patients with severe internal carotid artery stenosis or occlusion,” Academic radiology, vol. 21, iss. 2, pp. 168-74, 2014.
    [Bibtex]
    @article{peyman2013stenosis,
    author = {Zirak, P and {Delgado-Mederos}, R and Dinia, L and {Mart\'{i}--F\`{a}bregas}, J and Durduran, T},
    title = {Microvascular vs macrovascular cerebral vasomotor reactivity in patients with severe internal carotid artery stenosis or occlusion},
    journal = {Academic Radiology},
    year = {2014},
    OPTkey = {},
    volume = {21},
    number = {2},
    pages = {168-74},
    tdnote={icfoonlypaper,icfopaper},
    tdnote2 = {Highlighted MDlinx Your article was ranked by our team of physician editors as number 5 on our radiology site. },
    tdnote3= {http://www.mdlinx.com/radiology/news-article.cfm/5060708/diffuse-correlation-spectroscopy-near-infrared-spectroscoy},
    tddoi = { },
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • P. Zirak, R. {Delgado-Mederos}, L. Dinia, D. Carrera, J. {Martí–Fàbregas}, and T. Durduran, “Transcranial, diffuse optical monitoring of micro-vascular cerebral hemodynamics after thrombolysis in ischemic stroke,” J. biomed. opt., vol. 19, iss. 1, p. 18002, 2014.
    [Bibtex]
    @Article{peymanrtpa2013,
    title = {Transcranial, diffuse optical monitoring of micro-vascular cerebral hemodynamics after thrombolysis in ischemic stroke},
    author = {Zirak, P and {Delgado-Mederos}, R and Dinia, L and Carrera, D and {Mart\'{i}--F\`{a}bregas}, J and Durduran, T},
    journal = {J. Biomed. Opt.},
    year = {2014},
    key = {19},
    volume = {19},
    number = {1},
    pages = {018002},
    OPTmonth = {},
    tdnote = {icfoonlypaper, have pdf},
    OPTannote = {}
    }
  • R. Choe, P. M. Carlile, T. Durduran, J. M. Giammarco, D. R. Busch, K. W. Jun, B. J. Czerniecki, J. Tchou, M. D. Feldman, C. Mies, M. A. Rosen, M. D. Schnall, A. {DeMichele}, M. E. Putt, and A. G. Yodh, “Optically measured microvascular blood flow contrast of malignant breast tumors,” PLoS One, vol. accepted, 2014.
    [Bibtex]
    @Article{reginabloodflow2013,
    author = {Choe, R and Carlile, P M and Durduran, T and Giammarco, J M and Busch, D R and Jun, K W and Czerniecki, B J and Tchou, J and Feldman, M D and Mies, C and Rosen, M A and Schnall, M D and {DeMichele}, A and Putt, M E and Yodh, A G},
    title = {Optically measured microvascular blood flow contrast of malignant breast tumors},
    journal = {{PLoS One}},
    year = {2014},
    OPTkey = {},
    tdnote = {icfoonlypaper, have pdf},
    volume = {accepted},
    OPTnumber = {},
    OPTpages = {},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • H. M. Varma, C. P. Valdes, A. K. Kristoffersen, J. P. Culver, and T. Durduran, “Speckle contrast optical tomography: a new method for deep tissue three-dimensional tomography of blood flow,” Biomed. opt. express, vol. 5, iss. 4, pp. 1275-1289, 2014.
    [Bibtex]
    @article{scot2014,
    author = {Hari M. Varma and Claudia P. Valdes and Anna K. Kristoffersen and Joseph P. Culver and Turgut Durduran},
    journal = {Biomed. Opt. Express},
    keywords = {Speckle imaging; Medical and biological imaging; Tomographic imaging ; Image reconstruction techniques},
    number = {4},
    pages = {1275--1289},
    publisher = {OSA},
    title = {Speckle contrast optical tomography: A new method for deep tissue three-dimensional tomography of blood flow},
    volume = {5},
    month = {Apr},
    year = {2014},
    tdnote = {icfoonlypaper, have pdf},
    tdurl = {http://www.opticsinfobase.org/boe/abstract.cfm?URI=boe-5-4-1275},
    tddoi = {10.1364/BOE.5.001275},
    abstract = {A novel tomographic method based on the laser speckle contrast, speckle contrast optical tomography (SCOT) is introduced that allows us to reconstruct three dimensional distribution of blood flow in deep tissues. This method is analogous to the diffuse optical tomography (DOT) but for deep tissue blood flow. We develop a reconstruction algorithm based on first Born approximation to generate three dimensional distribution of flow using the experimental data obtained from tissue simulating phantoms.},
    }
  • C. H. Favilla, R. C. Mesquita, M. Mullen, T. Durduran, X. Lu, M. N. Kim, D. L. Minkoff, S. E. Kasner, J. H. Greenberg, A. G. Yodh, and J. A. Detre, “Optical bedside monitoring of cerebral blood flow in acute ischemic stroke patients during head of bed manipulation,” Stroke, vol. advance online, 2014.
    [Bibtex]
    @Article{yodhlabHOB2013,
    author = {Favilla, C H and Mesquita, R C and Mullen, M and Durduran, T and Lu, X and Kim, M N and Minkoff, D L and Kasner, S E and Greenberg, J H and Yodh, A G and Detre, J A},
    title = {Optical bedside monitoring of cerebral blood flow in acute ischemic stroke patients during head of bed manipulation},
    journal = {Stroke},
    year = {2014},
    OPTkey = {},
    volume = {advance online},
    OPTnumber = {},
    OPTpages = {},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }

2013

  • E. M. Buckley, J. M. Lynch, D. A. Goff, P. J. Schwab, W. B. Baker, T. Durduran, D. R. Busch, S. C. Nicolson, L. M. Montenegro, M. Y. Naim, R. Xiao, T. L. Spray, A. G. Yodh, W. J. Gaynor, and D. J. Licht, “Early postoperative changes in cerebral oxygen metabolism following neonatal cardiac surgery: effects of surgical duration,” The journal of thoracic and cardiovascular surgery, vol. 145, pp. 196-205, 2013.
    [Bibtex]
    @article{Buckley2012chdchmro2,
    title = "Early postoperative changes in cerebral oxygen metabolism following neonatal cardiac surgery: Effects of surgical duration",
    journal = "The Journal of Thoracic and Cardiovascular Surgery",
    volume = "145",
    TDnumber = "0",
    pages = "196-205",
    year = "2013",
    tdnote = "",
    tdissn = "0022-5223",
    tddoi = "10.1016/j.jtcvs.2012.09.057",
    TDnote ="Read at the 92nd Annual Meeting of The American Association for Thoracic Surgery, San Francisco, California, April 28-May 2, 2012.",
    TDurl = "http://www.sciencedirect.com/science/art i cle/pii/S0022522312012111",
    author = "Erin M. Buckley and Jennifer M. Lynch and Donna A. Goff and Peter J. Schwab and Wesley B. Baker and Turgut Durduran and David R. Busch and Susan C. Nicolson and Lisa M. Montenegro and Maryam Y. Naim and Rui Xiao and Thomas L. Spray and A.G. Yodh and J. William Gaynor and Daniel J. Licht"
    }
  • D. R. Busch, R. Choe, M. A. Rosen, W. Guo, T. Durduran, M. D. Feldman, C. Mies, B. J. Czerniecki, J. Tchou, A. DeMichele, M. D. Schnall, and A. G. Yodh, “Optical malignancy parameters for monitoring progression of breast cancer neoadjuvant chemotherapy,” Biomed. opt. express, vol. 4, iss. 1, pp. 105-121, 2013.
    [Bibtex]
    @article{davidbuschCAD2013,
    author = {David R. Busch and Regine Choe and Mark A. Rosen and Wensheng Guo and Turgut Durduran and Michael D. Feldman and Carolyn Mies and Brian J. Czerniecki and Julia Tchou and Angela DeMichele and Mitchell D. Schnall and Arjun G. Yodh},
    journal = {Biomed. Opt. Express},
    keywords = {Clinical applications; Mammography; Medical and biological imaging; Spectroscopy, tissue diagnostics},
    number = {1},
    pages = {105--121},
    publisher = {OSA},
    title = {Optical malignancy parameters for monitoring progression of breast cancer neoadjuvant chemotherapy},
    volume = {4},
    month = {Jan},
    year = {2013},
    tdurl = {http://www.opticsinfobase.org/boe/abstract.cfm?URI=boe-4-1-105},
    tddoi = {10.1364/BOE.4.000105},
    tdnote = {have pdf},
    abstract = {We introduce and demonstrate use of a novel, diffuse optical tomography (DOT) based breast cancer signature for monitoring progression of neoadjuvant chemotherapy. This signature, called probability of malignancy, is obtained by statistical image analysis of total hemoglobin concentration, blood oxygen saturation, and scattering coefficient distributions in the breast tomograms of a training-set population with biopsy-confirmed breast cancers. A pilot clinical investigation adapts this statistical image analysis approach for chemotherapy monitoring of three patients. Though preliminary, the study shows how to use the malignancy parameter for separating responders from partial-responders and demonstrates the potential utility of the methodology compared to traditional DOT quantification schemes.},
    }
  • D. R. Busch, R. Choe, T. Durduran, and A. G. Yodh, “Toward noninvasive characterization of breast cancer and cancer metabolism with diffuse optics,” PET clinics, vol. 8, iss. 3, pp. 345-365, 2013.
    [Bibtex]
    @Article{davidbuschpetclinicsreview2013,
    author = {Busch, D R and Choe, R and Durduran, T and Yodh, A G},
    title = {Toward noninvasive characterization of breast cancer and cancer metabolism with diffuse optics},
    journal = {{PET} Clinics},
    year = {2013},
    OPTkey = {},
    volume = {8},
    number = {3},
    pages = {345-365},
    OPTmonth = {},
    tdnote = {in vi ted review, have pdf , davetli},
    OPTannote = {}
    }
  • E. M. Buckley, M. Naim, J. Lynch, D. Goff, L. Diaz, S. Nicolson, L. Montenegro, N. Lavin, T. Durduran, T. Spray, J. Gaynor, M. Putt, A. G. Yodh, M. Fogel, and D. J. Licht, “Sodium bicarbonate causes dose-dependent increases in cerebral blood flow in infants and children with single ventricle physiology,” Pediatric research, vol. 73, pp. 668-73, 2013.
    [Bibtex]
    @Article{erinsodiumbicarbonate2012,
    author = {Buckley, E M and Naim, M and Lynch, J and Goff, D and Diaz, L and Nicolson, S and Montenegro, L and Lavin, N and Durduran, T and Spray, T and Gaynor, J and Putt, M and Yodh, A G and Fogel, M and Licht, D J},
    title = {Sodium Bicarbonate Causes Dose-Dependent Increases in Cerebral Blood Flow in Infants and Children with Single Ventricle Physiology},
    journal = {Pediatric Research},
    year = {2013},
    OPTkey = {},
    volume = {73},
    OPTnumber = {},
    pages = {668-73},
    OPTmonth = {},
    tdnote = {have pdf},
    OPTannote = {}
    }
  • J. Aguirre, A. Giannoula, T. Minagawa, L. Funk, P. Turon, and T. Durduran, “A low memory cost model based reconstruction algorithm exploiting translational symmetry for photoacoustic microscopy,” Biomed. opt. expr., vol. 4, iss. 12, pp. 2813-2827, 2013.
    [Bibtex]
    @Article{juanPAM2013_1,
    author = {Juan Aguirre and Alexia Giannoula and Taisuke Minagawa and Lutz Funk and Pau Turon and Turgut Durduran},
    title = {A low memory cost model based reconstruction algorithm exploiting translational symmetry for photoacoustic microscopy},
    journal = {Biomed. Opt. Expr.},
    year = {2013},
    OPTkey = {},
    volume = {4},
    tdurl = {https://www.opticsinfobase.org/boe/abstract.cfm?uri=boe-4-12-2813},
    number = {12},
    pages = {2813-2827},
    OPTmonth = {},
    tdnote={icfoonlypaper,icfopaper},
    OPTannote = {}
    }
  • M. N. Kim, B. L. Edlow, T. Durduran, S. Frangos, R. C. Mesquita, J. M. Levine, J. H. Greenberg, A. G. Yodh, and J. A. Detre, “Continuous optical monitoring of cerebral hemodynamics during head-of-bed manipulation in brain-injured adults,” Neurocrit. care, vol. accepted in press, 2013.
    [Bibtex]
    @article{meeri2013trauma,
    author = {Kim, M N and Edlow, B L and Durduran, T and Frangos, S and Mesquita, R C and Levine, J M and Greenberg, J H and Yodh, A G and Detre, J A},
    title = {Continuous optical monitoring of cerebral hemodynamics during head-of-bed manipulation in brain-injured adults},
    journal = {Neurocrit. Care},
    year = {2013},
    OPTkey = {},
    volume = {accepted in press},
    tddoi = {10.1007/s12028-013-9849-7},
    number = {},
    pages = {},
    tddoi = { },
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • T. Durduran and A. G. Yodh, “Diffuse correlation spectroscopy for non-invasive micro-vascular cerebral blood flow measurement,” Neuroimage, vol. 85, iss. 1, pp. 51-63, 2013.
    [Bibtex]
    @Article{neuroimagereview2013,
    author = {Durduran, T and Yodh, A G},
    title = {Diffuse correlation spectroscopy for non-invasive micro-vascular cerebral blood flow measurement},
    journal = {Neuroimage},
    year = {2013},
    OPTkey = {},
    volume = {85},
    number = {1},
    pages = {51-63},
    tddoi = { },
    OPTmonth = {January},
    OPTnote = {},
    OPTannote = {}
    }
  • P. Farzam, P. Zirak, T. Binzoni, and T. Durduran, “Pulsatile and steady-state hemodynamics of the human patella bone by diffuse optical spectroscopy,” Physiol. meas., vol. 34, iss. 8, p. 839, 2013.
    [Bibtex]
    @Article{parisaknee2013,
    author = {Farzam, P and Zirak, P and Binzoni, T and Durduran, T},
    title = {Pulsatile and steady-state hemodynamics of the human patella bone by diffuse optical spectroscopy},
    journal = {Physiol. Meas.},
    year = {2013},
    OPTkey = {},
    volume = {34},
    tdnote={icfoonlypaper,icfopaper, featured article},
    tdnote2={http://iopscience.iop.org/0967-3334/page/Highlights-of-2013 2013 highlight},
    number = {8},
    pages = {839},
    tddoi = { dx.doi.org/10.1088/0967-3334/34/8/839 },
    TDurl={http://stacks.iop.org/0967-3334/34/i=8/a=839},
    abstract={The cardiac cycle related pulsatile behavior of the absorption and scattering coefficients of diffuse light and the corresponding alterations in hemoglobin concentrations in the human patella was studied. The pulsations in scattering is considerably smaller than absorption. The difference in amplitude of absorption coefficient pulsations for different wavelengths was translated to pulsations in oxygenated and deoxygenated hemoglobin, which leads to strong pulsations in the total hemoglobin concentration and oxygen saturation. The physiological origin of the observed signals was confirmed by applying a thigh-cuff. Moreover, we have investigated the optical and physiological properties of the patella bone and their changes in response to arterial cuff occlusion.},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • R. C. Mesquita, M. E. Putt, M. Chandra, G. Yu, X. Xing, S. W. Han, G. Lech, Y. Shang, T. Durduran, C. Zhou, A. G. Yodh, and E. R. Mohler {III}, “Diffuse optical characterization of an exercising patient group with peripheral artery disease,” J. biomed. opt., vol. 18, iss. 5, p. 57007, 2013.
    [Bibtex]
    @Article{ricksonPAD2012,
    author = {Mesquita, R C and Putt, M E and Chandra, M and Yu, G and Xing, Xiaoman and Han, Sung Wan and Lech, G and Shang, Yu and Durduran, T and Zhou, C and Yodh, A G and Mohler {III}, E R},
    title = {Diffuse Optical Characterization of an Exercising Patient Group with Peripheral Artery Disease},
    journal = {J. Biomed. Opt.},
    year = {2013},
    OPTkey = {},
    volume = {18},
    number = {5},
    pages = {057007},
    OPTmonth = {},
    OPTnote = {have pdf, doi: 10.1117/1.JBO.18.5.057007},
    OPTannote = {}
    }
  • R. C. Mesquita, O. K. Faseyitan, P. E. Turkeltaub, E. M. Buckley, A. Thomas, M. N. Kim, T. Durduran, J. H. Greenberg, J. A. Detre, A. G. Yodh, and R. H. Hamilton, “Blood flow and oxygenation changes due to low-frequency repetitive transcranial magnetic stimulation of the cerebral cortex,” J. biomed. opt., vol. 18, iss. 6, p. 67006, 2013.
    [Bibtex]
    @Article{ricksonTMS2013,
    author = {Mesquita, R C and Faseyitan, O K and Turkeltaub, P E and Buckley, E M and Thomas, A and Kim, M N and Durduran, T and Greenberg, J H and Detre, J A and Yodh, A G and Hamilton, R H},
    title = {Blood Flow and Oxygenation Changes due to Low-Frequency Repetitive Transcranial Magnetic Stimulation of the Cerebral Cortex},
    journal = {J. Biomed. Opt.},
    year = {2013},
    OPTkey = {},
    volume = {18},
    number = {6},
    pages = {067006},
    month = {June},
    tdnote = {have pdf, doi: 10.1117/1.JBO.18.6.067006 },
    OPTannote = {}
    }

2012

  • E. M. Buckley, D. Hance, T. Pawlowski, J. Lynch, F. B. Wilson, R. C. Mesquita, T. Durduran, L. K. Diaz, M. E. Putt, D. J. Licht, M. A. Fogel, and A. G. Yodh, “Validation of diffuse correlation spectroscopic measurement of cerebral blood flow using phase-encoded velocity mapping MRI,” Journal of biomedical optics, vol. 17, iss. 3, pp. 37007-1, 2012.
    [Bibtex]
    @Article{erinvelocitymapping2012dcs,
    author = {Buckley, E M and Hance, D and Pawlowski, T and Lynch, J and Wilson, F B and Mesquita, R C and Durduran, T and Diaz, L K and Putt, M E and Licht, D J and Fogel, M A and Yodh, A G},
    title = { Validation of Diffuse Correlation Spectroscopic Measurement of Cerebral Blood Flow Using Phase-Encoded Velocity Mapping {MRI}},
    journal = {Journal of Biomedical Optics},
    year = {2012},
    OPTkey = {},
    volume = {17},
    number = {3},
    pages = {037007-1},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • R. Choe and T. Durduran, “Diffuse optical monitoring of the neoadjuvant breast cancer therapy,” IEEE journal of selected topics in quantum electronics, vol. 18, iss. 4, pp. 1367-1386, 2012.
    [Bibtex]
    @Article{reginareview2011,
    author = {Choe, R and Durduran, T},
    title = {Diffuse optical monitoring of the neoadjuvant breast cancer therapy},
    journal = {{IEEE} Journal of Selected Topics in Quantum Electronics},
    year = {2012},
    OPTkey = {},
    volume = {18},
    number = {4},
    pages = {1367-1386},
    month = {July/August},
    tdnote = {review paper, davetli, in vi t e d review},
    OPTannote = {}
    }
  • T. Minagawa, P. Zirak, U. M. Weigel, A. K. Kristoffersen, N. Mateos, A. Valencia, and T. Durduran, “Low-cost diffuse optical tomography for the classroom,” Am. j. phys, vol. 80, iss. 10, p. 876, 2012.
    [Bibtex]
    @Article{taisukelego2012,
    author = {Minagawa, T and Zirak, P and Weigel, U M and Kristoffersen, A K and Mateos, N and Valencia, A and Durduran, T},
    title = {Low-cost diffuse optical tomography for the classroom},
    journal = {Am. J. Phys},
    year = {2012},
    OPTkey = {},
    volume = {80},
    number = {10},
    pages = {876},
    month = {October},
    tdnote = {icfopaper, icfooonlypaper, lego, high-school, have pdf, http://ajp.aapt.org/resource/1/ajpias/v80/i10/p876_s1},
    OPTannote = {}
    }
  • W. B. Baker, Z. Sun, T. Hiraki, M. E. Putt, T. Durduran, M. Reivich, A. G. Yodh, and J. H. Greenberg, “Neurovascular coupling varies with level of global cerebral ischemia in a rat model,” J cereb blood flow metab, vol. 33, iss. 1, pp. 97-105, 2012.
    [Bibtex]
    @Article{wesleygradedischemia2012,
    author = {Baker, Wesley B and Sun, Zhenghui and Hiraki, Teruyuki and Putt, M E and Durduran, T and Reivich, M and Yodh, A G and Greenberg, J H},
    title = {Neurovascular Coupling Varies with Level of Global Cerebral Ischemia in a Rat Model},
    journal = {J Cereb Blood Flow Metab},
    year = {2012},
    OPTkey = {},
    volume = {33},
    number = {1},
    pages = {97-105},
    OPTmonth = {},
    OPTnote = {},
    tdnote = { http://dx.doi.org/10.1038/jcbfm.2012.137, http://www.nature.com/jcbfm/journal/vaop/ncurrent/full/jcbfm2012137a.html, have pdf},
    OPTannote = {}
    }

2011

  • R. C. Mesquita, T. Durduran, G. Yu, E. M. Buckley, M. N. Kim, C. Zhou, R. Choe, U. Sunar, and A. G. Yodh, “Direct measurement of tissue blood flow and metabolism with diffuse optics,” Philosophical transactions of the royal society a: mathematical, physical and engineering sciences, vol. 369, iss. 1955, pp. 4390-4406, 2011.
    [Bibtex]
    @article{royalsociety2011,
    author = {Mesquita, Rickson C. and Durduran, Turgut and Yu, Guoqiang and Buckley, Erin M. and Kim, Meeri N. and Zhou, Chao and Choe, Regine and Sunar, Ulas and Yodh, Arjun G.},
    title = {Direct measurement of tissue blood flow and metabolism with diffuse optics},
    volume = {369},
    number = {1955},
    pages = {4390-4406},
    year = {2011},
    tddoi = {10.1098/rsta.2011.0232},
    abstract ={Diffuse optics has proven useful for quantitative
    assessment of tissue oxy- and deoxyhaemoglobin
    concentrations and, more recently, for measurement
    of microvascular blood flow. In this paper, we focus
    on the flow monitoring technique: diffuse
    correlation spectroscopy (DCS). Representative
    clinical and pre-clinical studies from our
    laboratory illustrate the potential of
    DCS. Validation of DCS blood flow indices in human
    brain and muscle is presented. Comparison of DCS
    with arterial spin-labelled MRI, xenon-CT and
    Doppler ultrasound shows good agreement
    (0.50$<$r$<$0.95) over a wide range of tissue types
    and source detector distances, corroborating the
    potential of the method to measure perfusion
    non-invasively and in vivo at the microvasculature
    level. All-optical measurements of cerebral oxygen
    metabolism in both rat brain, following middle
    cerebral artery occlusion, and human brain, during
    functional activation, are also described. In both
    situations, the use of combined DCS and diffuse
    optical spectroscopy/near-infrared spectroscopy to
    monitor changes in oxygen consumption by the tissue
    is demonstrated. Finally, recent results spanning
    from gene expression-induced angiogenic response to
    stroke care and cancer treatment monitoring are
    discussed. Collectively, the research illustrates
    the capability of DCS to quantitatively monitor
    perfusion from bench to bedside, providing results
    that match up both with literature findings and with
    similar experiments performed with other
    techniques.},
    tdURL = {http://rsta.royalsocietypublishing.org/content/369/1955/4390.abstract},
    tdeprint = {http://rsta.royalsocietypublishing.org/content/369/1955/4390.full.pdf+html},
    journal = {Philosophical Transactions of the Royal Society A: Mathematical,
    Physical and Engineering Sciences}
    }

2010

  • B. L. Edlow, M. N. Kim, T. Durduran, C. Zhou, M. E. Putt, A. G. Yodh, J. H. Greenberg, and J. A. Detre, “The effects of healthy aging on cerebral hemodynamic responses to posture change,” Physiol meas, vol. 31, pp. 477-495, 2010.
    [Bibtex]
    @Article{brianagematch2009,
    author = {Edlow, B L and Kim, M N and Durduran, T and Zhou, C and Putt, M E and Yodh, A G and Greenberg, J H and Detre, J A},
    title = {The effects of healthy aging on cerebral hemodynamic responses to posture change},
    journal = {Physiol Meas},
    year = {2010},
    OPTkey = {},
    volume = {31},
    OPTnumber = {},
    pages = {477-495},
    OPTmonth = {},
    tdurl = {http://www.iop.org/EJ/abstract/0967-3334/31/4/002/},
    OPTannote = {}
    }
  • T. Durduran, C. Zhou, E. M. Buckley, M. N. Kim, G. Yu, R. Choe, W. J. Gaynor, T. L. Spray, S. M. Durning, S. E. Mason, L. M. Montenegro, S. C. Nicolson, R. A. Zimmerman, M. E. Putt, J. J. Wang, J. H. Greenberg, J. A. Detre, A. G. Yodh, and D. J. Licht, “Optical measurement of cerebral hemodynamics and oxygen metabolism in neonates with congenital heart defects,” J biomed opt, vol. 15, iss. 3, p. 37004, 2010.
    [Bibtex]
    @Article{chdpaper2009,
    author = {Durduran, T and Zhou, C and Buckley, E M and Kim, M N and Yu, G and Choe, R and Gaynor, W J and Spray, T L and Durning, S M and Mason, S E and Montenegro, L M and Nicolson, S C and Zimmerman, R A and Putt, M E and Wang, J J and Greenberg, J H and Detre, J A and Yodh, A G and Licht, D J},
    title = {Optical measurement of cerebral hemodynamics and oxygen
    metabolism in neonates with congenital heart defects},
    journal = {J Biomed Opt},
    year = {2010},
    OPTkey = {},
    volume = {15},
    number = {3},
    pages = {037004},
    month = {May/June},
    OPTnote = {},
    OPTannote = {}
    }
  • M. Süzen, A. Giannoula, and T. Durduran, “Compressed sensing in diffuse optical tomography,” Optics express, vol. 18, pp. 23676-23690, 2010.
    [Bibtex]
    @article{compressedsensing2010icfo1,
    author = {S\"uzen, M and Giannoula, A and Durduran, T},
    title = {Compressed Sensing in Diffuse Optical Tomography},
    volume={18},
    year = {2010},
    pages = {23676--23690},
    month = {November},
    journal = {Optics Express},
    tdurl = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-18-23-23676},
    tdnote2 = {Highlighted in Virtual Journal of Biomedical Optics, Vol 6, Issue 1, January 2011},
    tdnote3 = {Highlighted in Virtual Journal of Biological Physics Research -- January 15, 2011, http://www.virtualjournals.org/bio/ },
    tdnote={icfoonlypaper,icfopaper}
    }
  • T. Durduran, R. Choe, W. Baker, and A. G. Yodh, “Diffuse optics for tissue monitoring and tomography,” Rep prog phys, vol. 73, iss. 7, pp. 76701-76744, 2010.
    [Bibtex]
    @Article{dcsreview2009,
    author = {Durduran, T and Choe, R and Baker, W and Yodh, A G},
    title = {Diffuse Optics for tissue monitoring and tomography},
    journal = {Rep Prog Phys},
    year = {2010},
    OPTkey = {},
    volume = {73},
    number = {7},
    pages = {076701-076744},
    tddoi = { doi: 10.1088/0034-4885/73/7/076701},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • J. Luckl, W. Baker, Z. H. Sun, T. Durduran, A. G. Yodh, and J. H. Greenberg, “The biological effect of contralateral forepaw stimulation in rat focal cerebral ischemia: a multispectral optical imaging study,” Front. neuroenerg, vol. 2, iss. 19, pp. 1-9, 2010.
    [Bibtex]
    @Article{greenbergspeckle2010,
    author = {Luckl, J and Baker, W and Sun, Z H and Durduran, T and Yodh, A G and Greenberg, J H},
    title = {The biological effect of contralateral forepaw stimulation in rat focal cerebral ischemia: a multispectral optical imaging study},
    journal = {Front. Neuroenerg},
    year = {2010},
    OPTkey = {},
    volume = {2},
    number = {19},
    pages = {1-9},
    OPTmonth = {},
    TDDOI={10.3389/fnene.2010.00019},
    tdurl = {http://www.frontiersin.org/neuroscience/neuroenergetics/paper/10.3389/fnene.2010.00019},
    ABSTRACT = {Our group has already published the possible
    neuroprotective effect of contralateral forepaw
    stimulation in temporary focal ischemia in a
    study. However, the background is still unclear. In
    the present study we investigated the possible
    mechanism by monitoring focal ischemia with
    multispectral (laser speckle, imaging of intrinsic
    signals (OIS)) imaging. Sprague-Dawley rats were
    prepared using 1.2\% isoflurane anesthesia. The
    middle cerebral artery was occluded by
    photothrombosis (4mW) and the common carotid artery
    was ligated permanently. Physiological variables
    were constantly monitored during the experiment. A
    6x6 mm area centered 3 mm posterior and 4 mm lateral
    to Bregma was thinned for laser speckle and OIS
    imaging. Nine circular regions-of-interests (0.3 mm
    in diameter) were evenly spaced on the speckle
    contrast image for the analysis of peri-infarct flow
    transients, blood flow and metabolic changes. Both
    the sham (n=7) and forepaw stimulated animals (n=7)
    underwent neurological examinations 24 h after
    ischemia at which point all animals were sacrificed
    and the infarct size was determined by
    triphenyltetrazolium chloride. The physiological
    variables were in normal range and the experimental
    protocol did not cause significant differences
    between groups. Both the neurological scores
    (sham:3.6&plusmn;1.7, stimulated:4.3&plusmn;1.4,)
    and the infarct volume (sham:124&plusmn;39 mm3,
    stimulated: 147&plusmn;47 mm3,) did not show
    significant differences between groups. The forepaw
    stimulation did not increase the intraischemic flow
    neither over the penumbral or the peri-ischemic
    area. However, the hemoglobin transients related
    metabolic load (CMRO2) was significantly lower
    (p&lt;0.001) while the averaged number of hyperemic
    flow transients were significantly (p=0.013) higher
    in the forepaw (sham:3.5&plusmn;2.2, stimulated:
    7.0&plusmn;2.3,) stimulated animals.},
    OPTannote = {}
    }
  • D. Goff, E. Buckley, T. Durduran, J. J. Wang, and D. J. Licht, “Noninvasive cerebral perfusion imaging in high risk neonates,” Seminars in perinatology: recent advances in neuroimaging in the newborn, vol. 34, pp. 46-56, 2010.
    [Bibtex]
    @Article{lichtreview2009,
    author = {Goff, D and Buckley, E and Durduran, T and Wang, J J and Licht, D J},
    title = {Noninvasive Cerebral Perfusion Imaging in High Risk Neonates},
    journal = {Seminars in Perinatology: Recent Advances in Neuroimaging in the Newborn},
    year = {2010},
    OPTkey = {},
    volume = {34},
    OPTnumber = {},
    pages = {46-56},
    OPTmonth = {},
    tdurl = {http://www.seminperinat.com/article/S0146-0005\%2809\%2900093-7/abstract},
    tdnote = {have pdf},
    OPTannote = {}
    }
  • M. N. Kim, T. Durduran, S. Frangos, B. L. Edlow, E. M. Buckley, E. M. Heather, C. Zhou, G. Yu, R. Choe, Maloney-Wilensky, R. L. Wolf, J. H. Woo, M. S. Grady, J. H. Greenberg, J. M. Levine, A. G. Yodh, J. A. Detre, and W. A. Kofke, “Noninvasive measurement of cerebral blood flow and blood oxygenation using near-infrared and diffuse correlation spectroscopies in critically brain-injured adults,” Neurocritical care, vol. 12, iss. 2, pp. 173-180, 2010.
    [Bibtex]
    @Article{meeritrauma2009,
    author = {Kim, M N and Durduran, T and Frangos, S and Edlow, B L and Buckley, E M and Heather, E M and Zhou, C and Yu, G and Choe, R and {Maloney-Wilensky} E and Wolf, R L and Woo, J H and Grady, M S and Greenberg, J H and Levine, J M and Yodh, A G and Detre, J A and Kofke, W A},
    title = {Noninvasive Measurement of Cerebral Blood Flow and Blood Oxygenation Using Near-Infrared and Diffuse Correlation Spectroscopies in Critically Brain-Injured Adults},
    journal = {Neurocritical Care},
    year = {2010},
    OPTkey = {},
    volume = {12},
    tdurl = { http://www.springerlink.com/content/50r844m241254010},
    tdDOI = {10.1007/s12028-009-9305-x},
    number = {2},
    pages = {173-180},
    month = {April},
    OPTnote = {},
    OPTannote = {}
    }
  • S. Yu, T. B. Symons, T. Durduran, A. G. Yodh, and G. Yu, “Effects of muscle fiber motion on diffuse correlation spectroscopy blood flow measurements during exercise,” Biomedical optics express, vol. 1, iss. 2, pp. 500-511, 2010.
    [Bibtex]
    @Article{muscleartifactguoqiang2010,
    author = {Yu, S and Symons, T B and Durduran, T and Yodh, A G and Yu, G},
    title = {Effects of muscle fiber motion on diffuse correlation spectroscopy blood flow measurements during exercise},
    journal = {Biomedical Optics Express},
    year = {2010},
    OPTkey = {},
    volume = {1},
    number = {2},
    pages = {500-511},
    OPTmonth = {},
    TDnote = {},
    TDURL={http://www.opticsinfobase.org/boe/abstract.cfm?uri=boe-1-2-500},
    OPTannote = {}
    }
  • P. Zirak, R. {Delgado-Mederos}, J. {Martí–Fàbregas}, and T. Durduran, “Effects of acetazolamide on the micro- and macro-vascular cerebral hemodynamics: a diffuse optical and transcranial doppler ultrasound study,” Biomedical optics express, vol. 1, iss. 5, pp. 1443-1459, 2010.
    [Bibtex]
    @article{peyman2010acz,
    author = {Zirak, P and {Delgado-Mederos}, R and {Mart\'{i}--F\`{a}bregas}, J and Durduran, T},
    title = {Effects of Acetazolamide on the Micro- and Macro-Vascular Cerebral Hemodynamics: A Diffuse Optical and Transcranial Doppler Ultrasound Study},
    tdnote={icfoonlypaper,icfopaper},
    year = {2010},
    journal = {Biomedical Optics Express},
    month = {December},
    number = {5},
    tdnote = {highlighted in OSA spotlight: http://www.opticsinfobase.org/spotlight/summary.cfm?uri=boe-1-5-1443},
    tdurl={http://www.opticsinfobase.org/boe/abstract.cfm?uri=boe-1-5-1443},
    pages = {1443--1459},
    volume = {1}
    }

2009

  • T. M. Busch, X. Xing, G. Yu, A. G. Yodh, E. P. Wileyto, H. W. Wang, T. Durduran, T. C. Zhu, and K. K. H. Wang, “Fluence rate-dependent intratumor heterogeneity in physiologic and cytotoxic responses to photofrin photodynamic therapy,” Photochem. photobiol. sci., vol. 8, iss. 12, pp. 1683-1693, 2009.
    [Bibtex]
    @Article{busch2009frd,
    author = {Busch, T M and Xing, X and Yu, G and Yodh, A G and Wileyto, E P and Wang, H W and Durduran, T and Zhu, T C and Wang, K K H},
    title = {Fluence rate-dependent intratumor heterogeneity in physiologic and cytotoxic responses to Photofrin photodynamic therapy},
    journal = {Photochem. Photobiol. Sci.},
    year = {2009},
    OPTkey = {},
    volume = {8},
    number = {12},
    pages = {1683-1693},
    OPTmonth = {10},
    tdnote = {have pdf},
    TDDOI = {10.1039/b9pp00004f},
    OPTannote = {}
    }
  • D. R. Busch, W. Guo, R. Choe, T. Durduran, M. D. Feldman, C. Mies, M. A. Rosen, M. D. Schnall, B. J. Czerniecki, J. Tchou, A. DeMichele, M. E. Putt, and A. G. Yodh, “Computer aided automatic detection of malignant lesions in diffuse optical mammography,” Medical physics, vol. 37, iss. 4, pp. 1840-1849, 2009.
    [Bibtex]
    @Article{caddavidbusch2009,
    author = {Busch, David R and Guo, Wensheng and Choe, Regine and Durduran, Turgut and Feldman, Michael D and Mies, Carolyn and Rosen, Mark A and Schnall, Mitchell D and Czerniecki, Brian J and Tchou, Julia and DeMichele, Angela and Putt, Mary E and Yodh, Arjun G},
    title = {Computer Aided Automatic Detection of Malignant Lesions in Diffuse Optical Mammography},
    journal = {Medical Physics},
    year = {2009},
    OPTkey = {},
    volume = {37},
    number = {4},
    pages = {1840-1849},
    OPTmonth = {April},
    tdnote = {have pdf},
    OPTannote = {}
    }
  • G. J. Cerniglia, N. Pore, J. H. Tsai, S. Schultz, R. Mick, R. Choe, X. Xing, T. Durduran, A. G. Yodh, S. M. Evans, C. J. Koch, S. M. Hahn, H. Quon, C. M. Sehgal, W. M. F. Lee, and A. Maity, “Epidermal growth factor receptor inhibition modulates the microenvironment by vascular normalization to improve chemotherapy and radiotherapy efficacy,” PLoS ONE, vol. 4, iss. 8, p. e6539, 2009.
    [Bibtex]
    @article{cerniglia2009egf,
    author = {Cerniglia, G J and Pore, N and Tsai, J H and Schultz, S and Mick, R and Choe, R and Xing, X and Durduran, T and Yodh, A G and Evans, S M and Koch, C J and Hahn, S M and Quon, H and Sehgal, C M and Lee, W M. F and Maity, Amit},
    journal = {{PLoS ONE}},
    publisher = {Public Library of Science},
    title = {Epidermal Growth Factor Receptor Inhibition Modulates the Microenvironment by Vascular Normalization to Improve Chemotherapy and Radiotherapy Efficacy},
    year = {2009},
    month = {08},
    volume = {4},
    pages = {e6539},
    tdnote= {have pdf, amittumor paper},
    number = {8},
    TDdoi = {10.1371/journal.pone.0006539}
    }
  • C. Zhou, S. Eucker, T. Durduran, G. Yu, J. Ralston, S. H. Friess, R. N. Ichord, S. S. Margulies, and A. G. Yodh, “Diffuse optical monitoring of hemodynamic changes in piglet brain with closed head injury,” Journal of biomedical optics, vol. 14, p. 34015, 2009.
    [Bibtex]
    @Article{chaopiglet08,
    author = {Zhou, C and Eucker, S and Durduran, T and Yu, G and Ralston, J and Friess, S H and Ichord, R N and Margulies, S S and Yodh, A G},
    title = {Diffuse Optical Monitoring of Hemodynamic Changes in Piglet Brain with Closed Head Injury},
    journal = {Journal of Biomedical Optics},
    year = {2009},
    OPTkey = {},
    volume = {14},
    OPTnumber = {},
    pages = {034015},
    OPTmonth = {},
    TDnote = {have pdf},
    OPTannote = {}
    }
  • E. M. Buckley, N. M. Cook, T. Durduran, M. N. Kim, C. Zhou, R. Choe, G. Yu, S. Shultz, C. M. Sehgal, D. J. Licht, P. H. Arger, M. E. Putt, H. H. Hurt, and A. G. Yodh, “Cerebral hemodynamics in preterm infants during positional intervention measured with diffuse correlation spectroscopy and transcranial doppler ultrasound,” Optics express, vol. 17, pp. 12571-12581, 2009.
    [Bibtex]
    @Article{erinpremature2009,
    author = {Buckley, E M and Cook, N M and Durduran, T and Kim, M N and Zhou, C and Choe, R and Yu, Guoqiang and Shultz, S and Sehgal, C M and Licht, D J and Arger, P H and Putt, M E and Hurt, H H and Yodh, A G},
    title = {Cerebral Hemodynamics in Preterm Infants During Positional Intervention Measured with Diffuse Correlation Spectroscopy and Transcranial Doppler Ultrasound},
    journal = {Optics Express},
    year = {2009},
    OPTkey = {},
    volume = {17},
    OPTnumber = {},
    pages = {12571-12581},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • J. Luckl, C. Zhou, T. Durduran, A. G. Yodh, and J. H. Greenberg, “Characterization of peri-infarct flow transients with laser speckle and doppler after middle cerebral artery occlusion in the rat,” Journal of neuroscience research, vol. 87, iss. 5, pp. 1219-1229, 2009.
    [Bibtex]
    @Article{janos2008,
    author = {Luckl, Janos and Zhou, Chao and Durduran, Turgut and Yodh, A G and Greenberg, J H},
    title = {Characterization of peri-infarct flow transients with laser speckle and Doppler after middle cerebral artery occlusion in the rat},
    journal = {Journal of Neuroscience Research},
    year = {2009},
    OPTkey = {},
    volume = {87},
    number = {5},
    pages = {1219-1229},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • R. Choe, S. D. Konecky, A. Corlu, K. Lee, T. Durduran, D. R. Busch, S. Pathak, B. J. Czerniecki, J. Tchou, D. L. Fraker, A. {DeMichele}, B. Chance, S. R. Arridge, M. Schweiger, J. P. Culver, M. D. Schnall, M. E. Putt, M. A. Rosen, and A. G. Yodh, “Differentiation of benign and malignant breast tumors by in-vivo three-dimensional parallel-plate diffuse optical tomography,” J. biomed. opt., vol. 14, iss. 2, p. 24020, 2009.
    [Bibtex]
    @ARTICLE{RChoeJBO09,
    author = {Choe, R and Konecky, S D and Corlu, A and Lee, K and Durduran, T and
    Busch, D R and Pathak, S and Czerniecki, B J and Tchou, J and Fraker, D L and {DeMichele}, A and Chance, B and Arridge, S R and Schweiger, M and Culver, J P and Schnall, M D and Putt, M E and Rosen, M A and Yodh, A G},
    title = {Differentiation of Benign and Malignant Breast Tumors by In-Vivo Three-Dimensional Parallel-Plate Diffuse Optical Tomography},
    journal = {J. Biomed. Opt.},
    year = {2009},
    pages = {024020},
    volume = {14},
    number = {2}
    }
  • T. Durduran, C. Zhou, B. L. Edlow, G. Yu, R. Choe, M. N. Kim, B. L. Cucchiara, M. E. Putt, Q. Shah, S. E. Kasner, J. H. Greenberg, A. G. Yodh, and J. A. Detre, “Transcranial optical monitoring of cerebrovascular hemodynamics in acute stroke patients,” Optics express, vol. 17, iss. 5, pp. 3884-3902, 2009.
    [Bibtex]
    @Article{strokeDCS1_2009,
    author = {Durduran, T and Zhou, C and Edlow, B L and Yu, G and Choe, R and Kim, M N and Cucchiara, B L and Putt, M E and Shah, Q and Kasner, S E and Greenberg, J H and Yodh, A G and Detre, J A},
    title = {Transcranial Optical Monitoring of Cerebrovascular Hemodynamics in Acute Stroke Patients},
    journal = {Optics Express},
    year = {2009},
    OPTkey = {},
    volume = {17},
    number = {5},
    pages = {3884--3902},
    OPTmonth = {},
    TDnote = {have pdf, also published in virtual journal of biomedical optics, volume 4, issue 5},
    OPTannote = {}
    }

2008

  • C. Zhou, T. Shimazu, T. Durduran, J. Luckl, D. Y. Kimberg, G. Yu, X. H. Chen, J. A. Detre, A. G. Yodh, and J. H. Greenberg, “Acute functional recovery of cerebral blood flow after forebrain ischemia in rat,” J cereb blood flow metab, vol. 28, iss. 7, p. 1275, 2008.
    [Bibtex]
    @ARTICLE{chaojcbfmspeckle2008,
    AUTHOR={Zhou, C and Shimazu, T and Durduran, T and Luckl, J and Kimberg, D Y and Yu, G and Chen, X H and Detre, J A and Yodh, A G and Greenberg, J H},
    TITLE={Acute functional recovery of cerebral blood flow after forebrain ischemia in rat},
    JOURNAL={J Cereb Blood Flow Metab},
    YEAR={2008},
    MONTH={April},
    DAY={02},
    PUBLISHER={Nature Publishing Group},
    Volume={28},
    pages={1275},
    number={7},
    TDURL={http://dx.doi.org/10.1038/jcbfm.2008.21}
    }

2007

  • A. Corlu, R. Choe, T. Durduran, M. A. Rosen, M. Schweiger, S. R. Arridge, M. D. Schnall, and A. G. Yodh, “Three-dimensional in vivo fluorescence diffuse optical tomography of breast cancer in humans,” Optics express, vol. 15, iss. 11, pp. 6696-6716, 2007.
    [Bibtex]
    @Article{alperfluorescence07,
    author = {Corlu, A and Choe, R and Durduran, T and Rosen, M A and Schweiger, M and Arridge, S R and Schnall, M D and Yodh, A G},
    title = {Three-dimensional in vivo fluorescence diffuse optical tomography of breast cancer in humans},
    journal = {Optics Express},
    year = {2007},
    OPTkey = {},
    volume = {15},
    number = {11},
    pages = {6696-6716},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • C. Zhou, R. Choe, N. Shah, T. Durduran, G. Yu, A. Durkin, D. Hsiang, R. Mehta, J. Butler, A. Cerussi, B. J. Tromberg, and A. G. Yodh, “Diffuse optical monitoring of blood flow and oxygenation in human breast cancer during early stages of neoadjuvant chemotherapy,” J biomed opt, vol. 12, iss. 5, p. 51903, 2007.
    [Bibtex]
    @Article{chaojbo2007,
    author = {Zhou, C and Choe, R and Shah, N and Durduran, T and Yu, Guoqiang and Durkin, A and Hsiang, D and Mehta, R and Butler, J and Cerussi, A and Tromberg, B J and Yodh, A G},
    title = {Diffuse optical monitoring of blood flow and oxygenation in human breast cancer during early stages of neoadjuvant chemotherapy},
    journal = {J Biomed Opt},
    year = {2007},
    OPTkey = {},
    volume = {12},
    number = {5},
    pages = {051903},
    month = {Oct-Sept},
    OPTnote = {},
    OPTannote = {}
    }
  • G. Yu, T. Floyd, T. Durduran, C. Zhou, J. J. Wang, J. A. Detre, and A. G. Yodh, “Validation of diffuse correlation spectroscopy for muscle blood flow with concurrent arterial-spin-labeling perfusion,” Opt exp, vol. 15, pp. 1064-75, 2007.
    [Bibtex]
    @article{guoqiangmuscleaslmri1,
    Author = {Yu, G and Floyd, T and Durduran, T and Zhou, C and Wang, J J and Detre, J A and Yodh, A G},
    Title = {Validation of diffuse correlation spectroscopy for muscle blood flow with concurrent arterial-spin-labeling perfusion},
    Journal = {Opt Exp},
    Volume = {15},
    OPTNumber = {},
    pages = {1064-75},
    Year = {2007} }
  • U. Sunar, S. Makonnen, C. Zhou, T. Durduran, G. Yu, H. W. Wang, W. M. Lee, and A. G. Yodh, “Hemodynamic responses to antivascular therapy and ionizing radiation assessed by diffuse optical spectroscopies,” Opt. express, vol. 15, iss. 23, pp. 15507-15516, 2007.
    [Bibtex]
    @Article{ulasmouse2007,
    author = {Sunar, U and Makonnen, S and Zhou, C and Durduran, T and Yu, Guoqiang and Wang, H W and Lee, W M and Yodh, A G},
    title = {Hemodynamic responses to antivascular therapy and ionizing radiation assessed by diffuse optical spectroscopies},
    journal = {Opt. Express},
    year = {2007},
    OPTkey = {},
    volume = {15},
    number = {23},
    pages = {15507-15516},
    month = {November},
    tdurl = {http://www.opticsinfobase.org/abstract.cfm?URI=oe-15-23-15507},
    OPTnote = {},
    OPTannote = {}
    }

2006

  • C. Zhou, G. Yu, D. Furuya, J. H. Greenberg, A. G. Yodh, and T. Durduran, “Diffuse optical correlation tomography of cerebral blood flow during cortical spreading depression in rat brain,” Opt. exp, vol. 14, pp. 1125-44, 2006.
    [Bibtex]
    @Article{durdurancsdimaging2005,
    author = {Zhou, C and Yu, G and Furuya, D and Greenberg, J H and Yodh, A G and Durduran, T},
    title = {Diffuse Optical Correlation tomography of cerebral blood flow during cortical spreading depression in rat brain},
    journal = {Opt. Exp},
    year = {2006},
    OPTkey = {},
    volume = {14},
    OPTnumber = {},
    pages = {1125-44},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • G. Yu, T. Durduran, C. Zhou, T. C. Zhu, J. C. Finlay, T. M. Busch, S. B. Malkowicz, S. M. Hahn, and A. G. Yodh, “Real-time in situ monitoring of human prostate photodynamic therapy with diffuse light,” Photochem photobiol, vol. 82, pp. 1279-84, 2006.
    [Bibtex]
    @Article{guoqiangprostatepdt1,
    author = {Yu, G and Durduran, T and Zhou, C and Zhu, T C and Finlay, J C and Busch, T M and Malkowicz, S B and Hahn, S M and Yodh, A G},
    title = {Real-time In situ Monitoring of Human Prostate Photodynamic Therapy with Diffuse Light},
    journal = {Photochem Photobiol},
    year = {2006},
    OPTkey = {},
    volume = {82},
    OPTnumber = {},
    pages = {1279-84},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • U. Sunar, H. Quon, T. Durduran, J. Zhang, J. Du, C. Zhou, G. Yu, R. Choe, A. Kilger, R. Lustig, L. Loevner, S. Nioka, B. Chance, and A. G. Yodh, “Non-invasive diffuse optical measurement of blood flow and blood oxygenation for monitoring radiation therapy in patients with head and neck tumors: a pilot study,” J biomed opt, vol. 11, p. 64021, 2006.
    [Bibtex]
    @Article{ulasneckmedicalphysics,
    author = {Sunar, U and Quon, H and Durduran, T and Zhang, J and Du, J and Zhou, C and Yu , G and Choe, R and Kilger , A and Lustig , R and Loevner , L and Nioka, S and Chance, B and Yodh, A G},
    title = {Non-invasive diffuse optical measurement of blood flow and blood oxygenation for monitoring radiation therapy in patients with head and neck tumors: a pilot study},
    journal = {J Biomed Opt},
    year = {2006},
    OPTkey = {},
    volume = {11},
    OPTnumber = {},
    pages = {064021},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }

2005

  • A. Corlu, R. Choe, T. Durduran, K. Lee, M. Schweiger, E. M. C. Hillman, S. R. Arridge, and A. G. Yodh, “Diffuse optical tomography with spectral constraints and wavelength optimization,” Appl opt, vol. 44, pp. 2082-93, 2005.
    [Bibtex]
    @Article{alperspectral2004,
    author = {Corlu, A and Choe, R and Durduran, T and Lee, K and Schweiger, M and Hillman, E M C and Arridge, S R and Yodh, A G},
    title = {Diffuse Optical Tomography with Spectral Constraints and Wavelength Optimization},
    journal = {Appl Opt},
    year = {2005},
    OPTkey = {},
    volume = {44},
    OPTnumber = {},
    pages = {2082-93},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • T. Durduran, R. Choe, G. Yu, C. Zhou, J. C. Tchou, B. J. Czerniecki, and A. G. Yodh, “Diffuse optical measurement of blood flow in breast tumors,” Opt lett, vol. 30, pp. 2915-17, 2005.
    [Bibtex]
    @Article{durduranbreastflow2004,
    author = {Durduran, T and Choe, R and Yu, G and Zhou, C and Tchou, J C and Czerniecki, B J and Yodh, A G},
    title = {Diffuse Optical Measurement of Blood flow in Breast Tumors},
    journal = {Opt Lett},
    year = {2005},
    OPTkey = {},
    volume = {30},
    OPTnumber = {},
    pages = {2915-17},
    month = {November},
    OPTnote = {},
    OPTannote = {}
    }
  • G. Yu, T. Durduran, G. Lech, C. Zhou, B. Chance, E. R. Mohler, and A. G. Yodh, “Time-dependent blood flow and oxygenation in human skeletal muscle measured with noninvasive near-infrared diffuse optical spectroscopies,” J biomed opt, vol. 10, iss. 3, p. 024027-1-12, 2005.
    [Bibtex]
    @article{guoqiangmuscle,
    Author = {Yu, G and Durduran, T and Lech, G and Zhou, C and Chance, B and Mohler, E R and Yodh, A G},
    Title = {Time-dependent Blood Flow and Oxygenation in Human Skeletal Muscle Measured with Noninvasive Near-infrared Diffuse Optical Spectroscopies},
    Journal = {J Biomed Opt},
    Volume = {10},
    Number = {3},
    pages = {024027-1-12},
    Year = {2005} }
  • G. Yu, T. Durduran, C. Zhou, H. W. Wang, M. E. Putt, M. Saunders, C. M. Seghal, E. Glatstein, A. G. Yodh, and T. M. Busch, “Noninvasive monitoring of murine tumor blood flow during and after photodynamic therapy provides early assessment of therapeutic efficacy,” Clin. cancer res., vol. 11, pp. 3543-3552, 2005.
    [Bibtex]
    @Article{guoqiangpdtinprep,
    author = {Yu, G and Durduran, T and Zhou, C and Wang, H W and Putt, M E and Saunders, M and Seghal, C M and Glatstein, E and Yodh, A G and Busch, T M},
    title = {Noninvasive Monitoring of Murine Tumor Blood Flow During and After Photodynamic Therapy Provides Early Assessment of Therapeutic Efficacy},
    journal = {Clin. Cancer Res.},
    year = {2005},
    OPTkey = {},
    volume = {11},
    OPTnumber = {},
    pages = {3543-3552},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • R. Choe, A. Corlu, K. Lee, T. Durduran, S. D. Konecky, M. {Grosicka-Koptyra}, S. R. Arridge, B. J. Czerniecki, D. L. Fraker, A. {DeMichele}, B. Chance, M. A. Rosen, and A. G. Yodh, “Diffuse optical tomography of breast cancer during neoadjuvant chemotherapy: a case study with comparison to MRI,” Med. phys., vol. 32, pp. 1128-39, 2005.
    [Bibtex]
    @Article{reginachemotherapy2005,
    author = {Choe, R and Corlu, A and Lee, K and Durduran, T and Konecky, S D and {Grosicka-Koptyra}, M and Arridge, S R and Czerniecki, B J and Fraker, D L and {DeMichele}, A and Chance, B and Rosen, M A and Yodh, A G},
    title = {Diffuse Optical Tomography of Breast Cancer During Neoadjuvant Chemotherapy: a Case Study With Comparison to {MRI}},
    journal = {Med. Phys.},
    year = {2005},
    OPTkey = {},
    volume = {32},
    OPTnumber = {},
    pages = {1128-39},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }

2004

  • T. Durduran, G. Yu, M. G. Burnett, J. A. Detre, J. H. Greenberg, J. Wang, C. Zhou, and A. G. Yodh, “Diffuse optical measurements of blood flow, blood oxygenation and metabolism in human brain during sensorimotor cortex activation,” Opt lett, vol. 29, pp. 1766-1768, 2004.
    [Bibtex]
    @Article{durduranhumanbrain1,
    author = {Durduran, T and Yu, G and Burnett, M G and Detre, J A and Greenberg, J H and Wang, J and Zhou, C and Yodh, A G},
    title = {Diffuse Optical Measurements of Blood Flow, Blood Oxygenation and Metabolism in Human Brain during Sensorimotor Cortex Activation},
    journal = {Opt Lett},
    year = {2004},
    OPTkey = {},
    volume = {29},
    OPTnumber = {},
    pages = {1766-1768},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • T. Durduran, “Noninvasive measurements of tissue hemodynamics with hybrid diffuse optical methods,” Med phys (peer reviewed dissertation abstract), vol. 31, p. 2178, 2004.
    [Bibtex]
    @Article{durduranmedphys2004,
    author = {Durduran, T},
    title = {Noninvasive measurements of tissue hemodynamics with hybrid diffuse optical methods},
    journal = {Med Phys (peer reviewed dissertation abstract)},
    year = {2004},
    OPTkey = {},
    volume = {31},
    OPTnumber = {},
    pages = {2178},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • T. Durduran, M. G. Burnett, G. Yu, C. Zhou, D. Furuya, A. G. Yodh, J. A. Detre, and J. H. Greenberg, “Spatio-temporal quantification of cerebral blood flow during functional activation in rat somatosensory cortex using laser speckle flowmetry,” J. cereb. blood flow metab., vol. 24, pp. 518-525, 2004.
    [Bibtex]
    @Article{durduranspeckle1,
    author = {Durduran, T and Burnett, M G and Yu, G and Zhou, C and Furuya, D and Yodh, A G and Detre, J A and Greenberg, J H},
    title = {Spatio-Temporal Quantification of Cerebral Blood Flow During Functional Activation in Rat Somatosensory Cortex Using Laser Speckle Flowmetry},
    journal = {J. Cereb. Blood Flow Metab.},
    year = {2004},
    OPTkey = {},
    volume = {24},
    OPTnumber = {},
    pages = {518-525},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }

2003

  • A. Corlu, T. Durduran, R. Choe, M. Schweiger, E. M. C. Hillman, S. R. Arridge, and A. G. Yodh, “Uniqueness and wavelength optimization in continous-wave multispectral diffuse optical tomography,” Opt. lett, vol. 28, pp. 2339-2341, 2003.
    [Bibtex]
    @Article{corlunonuniqueness,
    author = {Corlu, A and Durduran, T and Choe, R and Schweiger, M and Hillman, E M C and Arridge, S R and Yodh, A G },
    title = {Uniqueness and wavelength optimization in continous-wave multispectral diffuse optical tomography},
    journal = {Opt. Lett},
    year = {2003},
    OPTkey = {},
    volume = {28},
    OPTnumber = {},
    pages = {2339-2341},
    OPTmonth = {},
    OPTnote = {},
    OPTannote = {}
    }
  • J. P. Culver, R. Choe, M. J. Holboke, L. Zubkov, T. Durduran, A. Slemp, V. Ntziachristos, D. N. Pattanayak, B. Chance, and A. G. Yodh, “Three-dimensional diffuse optical tomography in the plane parallel transmission geometry: evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging,” Med phys, vol. 30, pp. 235-247, 2003.
    [Bibtex]
    @article{culverbreast1,
    Author = {Culver, J P and Choe, R and Holboke, M J and Zubkov, L and Durduran, T and Slemp, A and Ntziachristos, V and Pattanayak, D N and Chance, B and Yodh, A G},
    Title = {Three-dimensional diffuse optical tomography in the plane parallel transmission geometry: Evaluation of a hybrid frequency domain/continuous wave clinical system for breast imaging},
    Journal = {Med Phys},
    Volume = {30},
    Pages = {235-247},
    Year = {2003} }
  • J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical tomography of cerebral blood flow, oxygenation and metabolism in rat during focal ischemia,” J. cereb. blood flow metab., vol. 23, pp. 911-24, 2003.
    [Bibtex]
    @article{culverischemia,
    Author = {Culver, J P and Durduran, T and Furuya, D and Cheung, C and Greenberg, J H and Yodh, A G},
    Title = {Diffuse Optical Tomography of Cerebral Blood Flow, Oxygenation and Metabolism in Rat During Focal Ischemia},
    Journal = {J. Cereb. Blood Flow Metab.},
    Volume = {23},
    Pages= {911-24},
    Year = {2003} }
  • G. Yu, T. Durduran, D. Furuya, J. H. Greenberg, and A. G. Yodh, “Frequency-domain multiplexing system for \it in vivo diffuse light measurements of rapid cerebral hemodynamics,” Appl. opt., vol. 42, pp. 2931-39, 2003.
    [Bibtex]
    @article{guoqianginstrument1,
    Author = {Yu, G and Durduran, T and Furuya, D and Greenberg, J H and Yodh, A G},
    Title = {Frequency-domain multiplexing system for {\it in vivo} diffuse light measurements of rapid cerebral hemodynamics},
    Journal = {Appl. Opt.},
    Volume = {42},
    Pages = {2931-39},
    Year = {2003} }
  • R. Choe, T. Durduran, G. Q. Yu, M. J. M. Nijland, B. Chance, A. G. Yodh, and N. Ramanujam, “Transabdominal near infrared oximetry of hypoxic stress in fetal sheep brain in utero,” Proc natl acad sci USA, vol. 100, pp. 12950-12954, 2003.
    [Bibtex]
    @ARTICLE{reginapnas,
    AUTHOR = {Choe, R and Durduran, T and Yu, G Q and Nijland, M J M and Chance, B and Yodh, A G and Ramanujam, N},
    TITLE = {Transabdominal near infrared oximetry of hypoxic
    stress in fetal sheep brain in utero},
    JOURNAL = {Proc Natl Acad Sci {USA}},
    YEAR = {2003},
    VOLUME = {100},
    PAGES = {12950-12954},
    }

2002

  • J. P. Culver, T. Durduran, D. Furuya, C. Cheung, J. H. Greenberg, and A. G. Yodh, “Diffuse optical measurement of hemoglobin and cerebral blood flow in rat brain during hypercapnia, hypoxia and cardiac arrest,” Adv. exp. biol., vol. {XXIII}, pp. 293-298, 2002.
    [Bibtex]
    @Article{culverisott,
    Author = {Culver, J P and Durduran, T and Furuya, D and Cheung, C and Greenberg, J H and Yodh, A G},
    Title = {Diffuse optical measurement of hemoglobin and cerebral blood flow in rat brain during hypercapnia, hypoxia and cardiac arrest},
    Journal = {Adv. Exp. Biol.},
    Pages = {293-298},
    Volume = {{XXIII}},
    Year = {2002} }
  • T. Durduran, R. Choe, J. P. Culver, L. Zubkov, M. J. Holboke, J. Giammarco, B. Chance, and A. G. Yodh, “Bulk optical properties of healthy female breast tissue,” Phys med biol, vol. 47, pp. 2847-2861, 2002.
    [Bibtex]
    @article{durduranbulk,
    Author = {Durduran, T and Choe, R and Culver, J P and Zubkov, L and Holboke, M J and Giammarco, J and Chance, B and Yodh, A G},
    Title = {Bulk optical properties of healthy female breast tissue},
    Journal = {Phys Med Biol},
    Volume = {47},
    Pages = {2847-2861},
    Year = {2002} }

2000

  • X. D. Li, D. N. Pattanayak, T. Durduran, J. P. Culver, B. Chance, and A. G. Yodh, “Near-field diffraction tomography with diffuse photon density waves,” Phys rev e, vol. 61, iss. 4, pp. 4295-4309, 2000.
    [Bibtex]
    @article{xingdefft2,
    Author = {Li, X D and Pattanayak, D N and Durduran, T and Culver, J P and Chance, B and Yodh, A G},
    Title = {Near-field diffraction tomography with diffuse photon density waves},
    Journal = {Phys Rev E},
    Volume = {61},
    Number = {4},
    Pages = {4295-4309},
    Year = {2000} }

1999

  • T. Durduran, J. P. Culver, M. J. Holboke, X. D. Li, L. Zubkov, B. Chance, D. N. Pattanayak, and A. G. Yodh, “Algorithms for 3d localization and imaging using near-field diffraction tomography with diffuse light,” Optics express, vol. 4, iss. 8, pp. 247-262, 1999.
    [Bibtex]
    @article{durduranoptexp,
    Author = {Durduran, T and Culver, J P and Holboke, M J and Li, X D and Zubkov, L and Chance, B and Pattanayak, D N and Yodh, A G},
    Title = {Algorithms for 3D localization and imaging using near-field diffraction tomography with diffuse light},
    Journal = {Optics Express},
    Volume = {4},
    Number = {8},
    Pages = {247-262},
    Year = {1999} }
  • Q. Zhu, T. Durduran, V. Ntziachristos, M. Holboke, and A. G. Yodh, “Imager that combines near-infrared diffusive light and ultrasound,” Opt lett, vol. 24, iss. 15, pp. 1050-1052, 1999.
    [Bibtex]
    @article{durduranultrasound1,
    Author = {Zhu, Q. and Durduran, T. and Ntziachristos, V. and Holboke, M. and Yodh, A. G.},
    Title = {Imager that combines near-infrared diffusive light and ultrasound},
    Journal = {Opt Lett},
    Volume = {24},
    Number = {15},
    Pages = {1050-1052},
    Year = {1999} }

1997

  • T. Durduran, B. Chance, A. G. Yodh, and D. A. Boas, “Does the photon diffusion coefficient depend on absorption?,” J. opt. soc. am. a, vol. 14, pp. 3358-3365, 1997.
    [Bibtex]
    @article{durdurandiffusioncoef,
    Author = {Durduran, T and Chance, B and Yodh, A G and Boas, D A},
    Title = {Does the photon diffusion coefficient depend on absorption?},
    Journal = {J. Opt. Soc. Am. A},
    Volume = {14},
    Pages = {3358-3365},
    Year = {1997} }
  • X. D. Li, T. Durduran, B. Chance, A. G. Yodh, and D. N. Pattanayak, “Diffraction tomography for biochemical imaging with diffuse-photon density waves,” Opt lett, vol. 22, iss. 8, p. 573-575, (errata: p 1198), 1997.
    [Bibtex]
    @article{xingdefft1,
    Author = {Li, X D and Durduran, T and Chance, B and Yodh, A G and Pattanayak, D N},
    Title = {Diffraction tomography for biochemical imaging with diffuse-photon density waves},
    Journal = {Opt Lett},
    Volume = {22},
    Number = {8},
    Pages = {573-575, (errata: p 1198)},
    Year = {1997} }